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Run TF-IDF normalisation for a MatisseObject

Source: R/dispatch.R
RunTFIDF.MatisseObject.Rd

Runs RunTFIDF on the embedded Seurat object and returns the updated MatisseObject. Used for ATAC-seq peak counts in multiome datasets before RunSVD.MatisseObject.

Usage

# S3 method for class 'MatisseObject'
RunTFIDF(object, ...)

Arguments

object

A MatisseObject.

...

Additional arguments forwarded to RunTFIDF (e.g. assay, method).

Value

The updated MatisseObject with TF-IDF normalised counts.

See also

RunSVD.MatisseObject, FindTopFeatures.MatisseObject