Compute a shared nearest-neighbour graph for a MatisseObject

Runs FindNeighbors on the embedded Seurat object and returns the updated MatisseObject. Typically called after RunPCA.MatisseObject and before FindClusters.MatisseObject.

Usage

# S3 method for class 'MatisseObject'
FindNeighbors(object, ...)

Arguments

object

A MatisseObject.

...

Additional arguments forwarded to FindNeighbors (e.g. dims, reduction).

Value

The updated MatisseObject with neighbour graph stored inside the embedded Seurat object.

See also

FindClusters.MatisseObject, RunPCA.MatisseObject