Find differentially expressed markers for a MatisseObject

Runs FindMarkers on the embedded Seurat object. Unlike most dispatch methods, this returns a data.frame of marker statistics rather than an updated MatisseObject.

Usage

# S3 method for class 'MatisseObject'
FindMarkers(object, ...)

Arguments

object

A MatisseObject.

...

Additional arguments forwarded to FindMarkers (e.g. ident.1, ident.2, group.by, features).

Value

A data.frame of marker genes with columns p_val, avg_log2FC, pct.1, pct.2, p_val_adj.

See also

FindClusters.MatisseObject